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Queue: PublicMetaMap
Subject: Processing long pharse I am getting resource error
Status: resolved
Created: Mon Feb 04 06:59:13 2013
Resolved: Tue Mar 05 09:03:09 2013
LastUpdated: Tue Mar 19 10:37:46 2013

Subject: 
Creator: 28
Created: 2013-02-04 11:59:13
Transaction: 1832
Parent: 0
MessageId: [email redacted]
Filename: 
ContentType: text/plain
ContentEncoding: none

Content: 
         >Category: mmtxT
         >Synopsis: Processing long pharse I am getting resource error
         >Confidential: no
         >Severity: serious
         >Priority: medium
         >Class: support
         >Submitter-Id: mmtxWeb
         >Release: 
         >Environment:
         >Operating System - MetaMap: 
         >OS Version - windows 7 professional
         >Java Version - Java 1.7
         >Description:
         Hello
         
         my name is Xabier and I am using Metamap api.
         
         When I try to process a long phrase I get this expection in Metamap.
         Error: error(resource_error(memory),resource_error(0,memory))
         
         how can I solve it?? is any solution?? 
         
         yours cincerelly
         
         Xabier Ortega.
         >How-To-Repeat:
         Process a long phrase, example:
         
         PARATHORMONE (RIA) 80.40 pg/mL RIA 0.14 ┬┐iu/mL T-3 free 2.38 pg/mL T-4 free 1.31 ng/dL SERUM 8.9 mg/dL phosphorus in SERUM 3.30 mg/dL THYROGLOBULIN (RIA) 71.0 ng/mL Anti-TG in calcium by T.S.H. < 0.5 IU/mL - follow same - review in 6 months.
         >Unformatted:




Subject: Processing long pharse I am getting resource error
Creator: 28
Created: 2013-03-05 14:03:09
Transaction: 1843
Parent: 0
MessageId: [email redacted]
Filename: 
ContentType: text/html
ContentEncoding: none

Content: Sorry for answering this message so late. 

MetaMap is designed by default to work on Journal text with proper grammar.   However, you can process bulleted lists like the your long phrase example by using the "--prune" option specifying a small pruning value somewhere between 10 and 20.

Sincerely,
Willie Rogers
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